AMR Tools Directory
Discover and access antimicrobial resistance analysis tools organized by category
Organism Specific Tools
Enterococcus faecium
Tools dedicated to the genomic analysis, typing, and resistance profiling of Enterococcus faecium.
Staphylococcus aureus
Tools dedicated to the genomic analysis, typing, and resistance profiling of Staphylococcus aureus.
Klebsiella pneumoniae
Tools dedicated to the genomic analysis, typing, and resistance profiling of Klebsiella pneumoniae.
Acinetobacter baumannii
Tools dedicated to the genomic analysis, typing, and resistance profiling of Acinetobacter baumannii.
Pseudomonas aeruginosa
Tools dedicated to the genomic analysis, typing, and resistance profiling of Pseudomonas aeruginosa.
Enterobacter spp.
Tools dedicated to the genomic analysis, typing, and resistance profiling of Enterobacter species.
Mycobacterium tuberculosis
Tools specifically developed for the analysis, surveillance, typing, and antimicrobial resistance prediction of Mycobacterium tuberculosis.
General Use Tools
AMR Gene Detection
Tools designed to identify antimicrobial resistance genes and resistance-associated determinants from biological sequence data.
Pathogen Identification
Tools designed to identify bacterial pathogens and determine their taxonomic identity from biological sequence data.
Strain & Sequence Typing
Tools designed to classify bacterial isolates into sequence types, strains, lineages, or other genomic groups.
Virulence Factor Detection
Tools designed to identify virulence genes and other genetic determinants associated with bacterial pathogenicity.
Genomic Epidemiology
Tools designed to analyze genomic relationships between bacterial isolates for surveillance, transmission, and outbreak investigation.
AMR Phenotype Prediction
Tools designed to predict antimicrobial susceptibility or resistance phenotypes from genomic and biological data.