AMR Tools Directory

Discover and access antimicrobial resistance analysis tools organized by category

    Organism Specific Tools

    Enterococcus faecium

    Tools dedicated to the genomic analysis, typing, and resistance profiling of Enterococcus faecium.

    Staphylococcus aureus

    Tools dedicated to the genomic analysis, typing, and resistance profiling of Staphylococcus aureus.

    Klebsiella pneumoniae

    Tools dedicated to the genomic analysis, typing, and resistance profiling of Klebsiella pneumoniae.

    Acinetobacter baumannii

    Tools dedicated to the genomic analysis, typing, and resistance profiling of Acinetobacter baumannii.

    Pseudomonas aeruginosa

    Tools dedicated to the genomic analysis, typing, and resistance profiling of Pseudomonas aeruginosa.

    Enterobacter spp.

    Tools dedicated to the genomic analysis, typing, and resistance profiling of Enterobacter species.

    Mycobacterium tuberculosis

    Tools specifically developed for the analysis, surveillance, typing, and antimicrobial resistance prediction of Mycobacterium tuberculosis.

    General Use Tools

    AMR Gene Detection

    Tools designed to identify antimicrobial resistance genes and resistance-associated determinants from biological sequence data.

    Pathogen Identification

    Tools designed to identify bacterial pathogens and determine their taxonomic identity from biological sequence data.

    Strain & Sequence Typing

    Tools designed to classify bacterial isolates into sequence types, strains, lineages, or other genomic groups.

    Virulence Factor Detection

    Tools designed to identify virulence genes and other genetic determinants associated with bacterial pathogenicity.

    Genomic Epidemiology

    Tools designed to analyze genomic relationships between bacterial isolates for surveillance, transmission, and outbreak investigation.

    AMR Phenotype Prediction

    Tools designed to predict antimicrobial susceptibility or resistance phenotypes from genomic and biological data.